Genome Meta Information: Paenibacillus phoenicis D14 (GCA_000159955.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000159955.1 | ||
| HOMD Taxon-ID | HMT-0786 | ||
| Species Name (in use by HOMD) | Paenibacillus phoenicis | ||
| Organism Name (as deposited) | HMT-786 Paenibacillus phoenicis D14 | ||
| Strain or Isolate | D14 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Paenibacillales;f__Paenibacillaceae;g__Fontibacillus; s__Fontibacillus phoenicis |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 5,097,411 (bp) | ||
| GC Percentage | 54.15 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/955/GCA_000159955.1_ASM15995v1 | ||
| CDS | 4551 | ||
| Genes | 4683 | ||
| mRNA | 4683 | ||
| misc RNA | 59 | ||
| rRNA | 2 | ||
| tRNA | 70 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.47 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM15995v1 |
| GenBank Assembly Accession | GCA_000159955.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000159955.1 [NCBI] |
| BioSample | SAMN02463722 [NCBI] |
| BioProject | PRJNA34703 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:31.377 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACIH01 |
| NCBI TaxID | 621372 |
| Isolation Source | missing |
| Geo Location | not determined |
