Genome Meta Information: Alloprevotella tannerae ATCC 51259 (GCA_000159995.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000159995.1 | ||
| HOMD Taxon-ID | HMT-0466 | ||
| Species Name (in use by HOMD) | Alloprevotella tannerae | ||
| Organism Name (as deposited) | HMT-466 Alloprevotella tannerae ATCC 51259 | ||
| Strain or Isolate | ATCC 51259 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Alloprevotella; s__Alloprevotella tannerae |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,585,719 (bp) | ||
| GC Percentage | 46.62 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/995/GCA_000159995.1_ASM15999v1 | ||
| CDS | 2158 | ||
| Genes | 2218 | ||
| mRNA | 2218 | ||
| misc RNA | 4 | ||
| rRNA | 7 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 96.98 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM15999v1 |
| GenBank Assembly Accession | GCA_000159995.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000159995.1 [NCBI] |
| BioSample | SAMN00008849 [NCBI] |
| BioProject | PRJNA33153 [NCBI] |
| Submitter | Washington University Genome Sequencing Center |
| Submission Date | 2010-02-19T21:10:08.700 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACIJ02 |
| NCBI TaxID | 626522 |
| Isolation Source | missing |
| Geo Location | not determined |
