Genome Meta Information: Catonella morbi ATCC 51271 (GCA_000160035.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000160035.2 | ||
| HOMD Taxon-ID | HMT-0165 | ||
| Species Name (in use by HOMD) | Catonella morbi | ||
| Organism Name (as deposited) | HMT-165 Catonella morbi ATCC 51271 | ||
| Strain or Isolate | ATCC 51271 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Catonella; s__Catonella morbi |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 21.4 | ||
| Contigs |
|
||
| Total Sequence Length | 3,479,204 (bp) | ||
| GC Percentage | 37.17 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/035/GCA_000160035.2_ASM16003v2 | ||
| CDS | 3087 | ||
| Genes | 3191 | ||
| mRNA | 3191 | ||
| misc RNA | 55 | ||
| rRNA | 5 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.75 % | ||
| CheckM Contamination | 1.88 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16003v2 |
| GenBank Assembly Accession | GCA_000160035.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000160035.2 [NCBI] |
| BioSample | SAMN02436865 [NCBI] |
| BioProject | PRJNA33121 [NCBI] |
| Submitter | Washington University Genome Sequencing Center |
| Submission Date | 2013-12-04T15:03:57.196 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACIL03 |
| NCBI TaxID | 592026 |
| Isolation Source | gingival crevice |
| Geo Location | |
