Genome Meta Information: Oribacterium sinus F0268 (GCA_000160635.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000160635.1 | ||
| HOMD Taxon-ID | HMT-0457 | ||
| Species Name (in use by HOMD) | Oribacterium sinus | ||
| Organism Name (as deposited) | HMT-457 Oribacterium sinus F0268 | ||
| Strain or Isolate | F0268 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Oribacterium; s__Oribacterium sinus |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,706,954 (bp) | ||
| GC Percentage | 44.68 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/635/GCA_000160635.1_ASM16063v1 | ||
| CDS | 2264 | ||
| Genes | 2326 | ||
| mRNA | 2326 | ||
| misc RNA | 18 | ||
| rRNA | 2 | ||
| tRNA | 41 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.47 % | ||
| CheckM Completeness | 96.39 % | ||
| CheckM Contamination | 3.63 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16063v1 |
| GenBank Assembly Accession | GCA_000160635.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000160635.1 [NCBI] |
| BioSample | SAMN00002241 [NCBI] |
| BioProject | PRJNA34635 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2009-04-17T10:38:02.500 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACKX01 |
| NCBI TaxID | 585501 |
| Isolation Source | missing |
| Geo Location | not determined |
