Genome Meta Information: Limosilactobacillus coleohominis 101-4-CHN (GCA_000161935.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000161935.1 | ||
| HOMD Taxon-ID | HMT-0816 | ||
| Species Name (in use by HOMD) | Limosilactobacillus coleohominis | ||
| Organism Name (as deposited) | HMT-816 Limosilactobacillus coleohominis 101-4-CHN | ||
| Strain or Isolate | 101-4-CHN | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Limosilactobacillus; s__Limosilactobacillus coleohominis_A |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 1,725,829 (bp) | ||
| GC Percentage | 42.04 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/935/GCA_000161935.1_ASM16193v1 | ||
| CDS | 1709 | ||
| Genes | 1796 | ||
| mRNA | 1796 | ||
| misc RNA | 25 | ||
| rRNA | 3 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.95 % | ||
| CheckM Completeness | 99.56 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16193v1 |
| GenBank Assembly Accession | GCA_000161935.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000161935.1 [NCBI] |
| BioSample | SAMN02463725 [NCBI] |
| BioProject | PRJNA37949 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:31.853 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACOH01 |
| NCBI TaxID | 575594 |
| Isolation Source | missing |
| Geo Location | not determined |
