Genome Meta Information: Segatella buccae D17 (GCA_000162455.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000162455.1 | ||
| HOMD Taxon-ID | HMT-0560 | ||
| Species Name (in use by HOMD) | Segatella buccae | ||
| Organism Name (as deposited) | HMT-560 Segatella buccae D17 | ||
| Strain or Isolate | D17 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella buccae |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 3,357,950 (bp) | ||
| GC Percentage | 51.83 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/455/GCA_000162455.1_ASM16245v1 | ||
| CDS | 2733 | ||
| Genes | 2792 | ||
| mRNA | 2792 | ||
| misc RNA | 9 | ||
| rRNA | 3 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.56 % | ||
| CheckM Completeness | 96.84 % | ||
| CheckM Contamination | 1.79 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16245v1 |
| GenBank Assembly Accession | GCA_000162455.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000162455.1 [NCBI] |
| BioSample | SAMN02463748 [NCBI] |
| BioProject | PRJNA38737 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:34.710 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACRB01 |
| NCBI TaxID | 575611 |
| Isolation Source | missing |
| Geo Location | not determined |
