Genome Meta Information: Segatella oris F0302 (GCA_000162915.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000162915.1 | ||
| HOMD Taxon-ID | HMT-0311 | ||
| Species Name (in use by HOMD) | Segatella oris | ||
| Organism Name (as deposited) | HMT-311 Segatella oris F0302 | ||
| Strain or Isolate | F0302 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella oris |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 3,251,636 (bp) | ||
| GC Percentage | 43.94 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/915/GCA_000162915.1_ASM16291v1 | ||
| CDS | 2772 | ||
| Genes | 2848 | ||
| mRNA | 2848 | ||
| misc RNA | 14 | ||
| rRNA | 9 | ||
| tRNA | 51 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | 97.38 % | ||
| CheckM Completeness | 98.86 % | ||
| CheckM Contamination | 2.18 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16291v1 |
| GenBank Assembly Accession | GCA_000162915.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000162915.1 [NCBI] |
| BioSample | SAMN00008848 [NCBI] |
| BioProject | PRJNA38329 [NCBI] |
| Submitter | WUGSC |
| Submission Date | 2010-02-19T21:07:09.703 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACUZ02 |
| NCBI TaxID | 649760 |
| Isolation Source | missing |
| Geo Location | not determined |
