Genome Meta Information: Paludibacteraceae [G1] bacterium HMT-274 F0058 (GCA_000163695.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000163695.1 | ||
| HOMD Taxon-ID | HMT-0274 | ||
| Species Name (in use by HOMD) | Paludibacteraceae [G1] bacterium HMT-274 | ||
| Organism Name (as deposited) | HMT-274 Paludibacteraceae [G1] bacterium HMT-274 F0058 | ||
| Strain or Isolate | F0058 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Paludibacteraceae;g__F0058; s__F0058 sp000163695 |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 39 | ||
| Contigs |
|
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| Total Sequence Length | 2,113,539 (bp) | ||
| GC Percentage | 43.25 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/695/GCA_000163695.1_ASM16369v1 | ||
| CDS | 1930 | ||
| Genes | 1991 | ||
| mRNA | 1991 | ||
| misc RNA | 11 | ||
| rRNA | 5 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16369v1 |
| GenBank Assembly Accession | GCA_000163695.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000163695.1 [NCBI] |
| BioSample | SAMN02463821 [NCBI] |
| BioProject | PRJNA41957 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:43.283 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ADCM01 |
| NCBI TaxID | 575590 |
| Isolation Source | missing |
| Geo Location | not determined |
