Genome Meta Information: Megasphaera micronuciformis F0359 (GCA_000165735.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000165735.1 | ||
| HOMD Taxon-ID | HMT-0122 | ||
| Species Name (in use by HOMD) | Megasphaera micronuciformis | ||
| Organism Name (as deposited) | HMT-122 Megasphaera micronuciformis F0359 | ||
| Strain or Isolate | F0359 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Megasphaeraceae;g__Anaeroglobus; s__Anaeroglobus micronuciformis |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 124.7 | ||
| Contigs |
|
||
| Total Sequence Length | 1,765,528 (bp) | ||
| GC Percentage | 45.44 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/735/GCA_000165735.1_ASM16573v1 | ||
| CDS | 1699 | ||
| Genes | 1779 | ||
| mRNA | 1779 | ||
| misc RNA | 28 | ||
| rRNA | 3 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.96 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16573v1 |
| GenBank Assembly Accession | GCA_000165735.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000165735.1 [NCBI] |
| BioSample | SAMN00189149 [NCBI] |
| BioProject | PRJNA43125 [NCBI] |
| Submitter | Washington University Genome Center |
| Submission Date | 2010-12-23T15:39:04.037 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AECS01 |
| NCBI TaxID | 706434 |
| Isolation Source | missing |
| Geo Location | not determined |
