Genome Meta Information: Neisseria mucosa ATCC 25996 (GCA_000173875.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000173875.1 | ||
| HOMD Taxon-ID | HMT-0682 | ||
| Species Name (in use by HOMD) | Neisseria mucosa | ||
| Organism Name (as deposited) | HMT-682 Neisseria mucosa ATCC 25996 | ||
| Strain or Isolate | ATCC 25996 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria mucosa_A |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,578,748 (bp) | ||
| GC Percentage | 51.1 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/875/GCA_000173875.1_ASM17387v1 | ||
| CDS | 2379 | ||
| Genes | 2455 | ||
| mRNA | 2455 | ||
| misc RNA | 17 | ||
| rRNA | 5 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.82 % | ||
| CheckM Completeness | 98.77 % | ||
| CheckM Contamination | 0.4 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM17387v1 |
| GenBank Assembly Accession | GCA_000173875.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000173875.1 [NCBI] |
| BioSample | SAMN00008841 [NCBI] |
| BioProject | PRJNA30477 [NCBI] |
| Submitter | Washington University Genome Sequencing Center |
| Submission Date | 2010-02-19T20:51:09.413 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ACDX02 |
| NCBI TaxID | 546266 |
| Isolation Source | missing |
| Geo Location | not determined |
