Genome Meta Information: Neisseria lactamica ATCC 23970 (GCA_000173995.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000173995.1 | ||
| HOMD Taxon-ID | HMT-0649 | ||
| Species Name (in use by HOMD) | Neisseria lactamica | ||
| Organism Name (as deposited) | HMT-649 Neisseria lactamica ATCC 23970 | ||
| Strain or Isolate | ATCC 23970 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria lactamica |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,171,992 (bp) | ||
| GC Percentage | 52.22 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/995/GCA_000173995.1_ASM17399v1 | ||
| CDS | 2086 | ||
| Genes | 2157 | ||
| mRNA | 2157 | ||
| misc RNA | 20 | ||
| rRNA | 3 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.97 % | ||
| CheckM Completeness | 93.82 % | ||
| CheckM Contamination | 0.5 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM17399v1 |
| GenBank Assembly Accession | GCA_000173995.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000173995.1 [NCBI] |
| BioSample | SAMN00008840 [NCBI] |
| BioProject | PRJNA30475 [NCBI] |
| Submitter | Washington University Genome Sequencing Center |
| Submission Date | 2010-02-19T20:48:06.343 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ACEQ02 |
| NCBI TaxID | 546265 |
| Isolation Source | missing |
| Geo Location | not determined |
