Genome Meta Information: Staphylococcus capitis SK14 (GCA_000174135.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000174135.1 | ||
| HOMD Taxon-ID | HMT-0116 | ||
| Species Name (in use by HOMD) | Staphylococcus capitis | ||
| Organism Name (as deposited) | HMT-116 Staphylococcus capitis SK14 | ||
| Strain or Isolate | SK14 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus capitis |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,435,835 (bp) | ||
| GC Percentage | 32.77 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/135/GCA_000174135.1_ASM17413v1 | ||
| CDS | 2332 | ||
| Genes | 2444 | ||
| mRNA | 2444 | ||
| misc RNA | 50 | ||
| rRNA | 4 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.95 % | ||
| CheckM Completeness | 99.59 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM17413v1 |
| GenBank Assembly Accession | GCA_000174135.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000174135.1 [NCBI] |
| BioSample | SAMN00000713 [NCBI] |
| BioProject | PRJNA31013 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2008-10-03T13:50:02.017 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ACFR01 |
| NCBI TaxID | 553212 |
| Isolation Source | skin from right arm of human male |
| Geo Location | not determined |
