Genome Meta Information: Capnocytophaga gingivalis ATCC 33624 (GCA_000174755.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000174755.1 | ||
| HOMD Taxon-ID | HMT-0337 | ||
| Species Name (in use by HOMD) | Capnocytophaga gingivalis | ||
| Organism Name (as deposited) | HMT-337 Capnocytophaga gingivalis ATCC 33624 | ||
| Strain or Isolate | ATCC 33624 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga; s__Capnocytophaga gingivalis |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,667,138 (bp) | ||
| GC Percentage | 40.49 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/755/GCA_000174755.1_ASM17475v1 | ||
| CDS | 2467 | ||
| Genes | 2530 | ||
| mRNA | 2530 | ||
| misc RNA | 6 | ||
| rRNA | 8 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.87 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM17475v1 |
| GenBank Assembly Accession | GCA_000174755.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000174755.1 [NCBI] |
| BioSample | SAMN00001917 [NCBI] |
| BioProject | PRJNA31387 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2009-02-24T11:35:09.460 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ACLQ01 |
| NCBI TaxID | 553178 |
| Isolation Source | missing |
| Geo Location | not determined |
