Taxon Table | Genome Table
Genome Meta Information:
Porphyromonas
uenonis
60-3 (GCA_000174775.1)
| HOMD Genome-ID |
GCA_000174775.1
|
| HOMD Taxon-ID |
HMT-0785
|
| Species Name (in use by HOMD) |
Porphyromonas uenonis
|
| Organism Name (as deposited) |
HMT-785 Porphyromonas uenonis 60-3
|
| Strain or Isolate |
60-3
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;
s__Porphyromonas uenonis_A |
| Sequencing Technology |
|
| Genome Coverage |
|
| Contigs |
Number of Contigs: 250
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,242,885 (bp) |
| GC Percentage |
52.46
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/775/GCA_000174775.1_ASM17477v1
|
| CDS |
1881
|
| Genes |
1943
|
| mRNA |
1943
|
| misc RNA |
11
|
| rRNA |
5
|
| tRNA |
45
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
93.49 %
|
| CheckM Completeness |
98.85 %
|
| CheckM Contamination |
0.58 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM17477v1
|
| GenBank Assembly Accession |
GCA_000174775.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_000174775.1
[NCBI]
|
| BioSample |
SAMN00002220
[NCBI]
|
| BioProject |
PRJNA34101
[NCBI]
|
| Submitter |
J. Craig Venter Institute
|
| Submission Date |
2009-04-09T16:18:08.937
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
ACLR01
|
| NCBI TaxID |
596327
|
| Isolation Source |
missing
|
| Geo Location |
not determined
|
