Genome Meta Information: Neisseria subflava SK114 (GCA_000175275.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000175275.1 | ||
| HOMD Taxon-ID | HMT-0476 | ||
| Species Name (in use by HOMD) | Neisseria subflava | ||
| Organism Name (as deposited) | HMT-476 Neisseria subflava SK114 | ||
| Strain or Isolate | SK114 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria subflava |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,204,114 (bp) | ||
| GC Percentage | 49.26 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/275/GCA_000175275.1_ASM17527v1 | ||
| CDS | 2105 | ||
| Genes | 2238 | ||
| mRNA | 2238 | ||
| misc RNA | 57 | ||
| rRNA | 15 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.14 % | ||
| CheckM Completeness | 97.48 % | ||
| CheckM Contamination | 0.44 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM17527v1 |
| GenBank Assembly Accession | GCA_000175275.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000175275.1 [NCBI] |
| BioSample | SAMN00001913 [NCBI] |
| BioProject | PRJNA34085 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2009-02-20T11:54:06.613 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ACQV01 |
| NCBI TaxID | 596320 |
| Isolation Source | missing |
| Geo Location | not determined |
