Genome Meta Information: Peptoniphilus lacrimalis 315-B (GCA_000176955.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000176955.1 | ||
| HOMD Taxon-ID | HMT-0836 | ||
| Species Name (in use by HOMD) | Peptoniphilus lacrimalis | ||
| Organism Name (as deposited) | HMT-836 Peptoniphilus lacrimalis 315-B | ||
| Strain or Isolate | 315-B | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus_A; s__Peptoniphilus_A lacrimalis |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 1,699,205 (bp) | ||
| GC Percentage | 29.91 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/955/GCA_000176955.1_ASM17695v1 | ||
| CDS | 1550 | ||
| Genes | 1617 | ||
| mRNA | 1617 | ||
| misc RNA | 25 | ||
| rRNA | 2 | ||
| tRNA | 39 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.77 % | ||
| CheckM Completeness | 97.32 % | ||
| CheckM Contamination | 0.15 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM17695v1 |
| GenBank Assembly Accession | GCA_000176955.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000176955.1 [NCBI] |
| BioSample | SAMN00008345 [NCBI] |
| BioProject | PRJNA34107 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2010-01-28T11:07:05.807 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ADDO01 |
| NCBI TaxID | 596330 |
| Isolation Source | missing |
| Geo Location | not determined |
