Genome Meta Information: Prevotella amnii CRIS 21A-A (GCA_000177355.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000177355.1 | ||
| HOMD Taxon-ID | HMT-0797 | ||
| Species Name (in use by HOMD) | Prevotella amnii | ||
| Organism Name (as deposited) | HMT-797 Prevotella amnii CRIS 21A-A | ||
| Strain or Isolate | CRIS 21A-A | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella amnii |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 113 | ||
| Contigs |
|
||
| Total Sequence Length | 2,415,558 (bp) | ||
| GC Percentage | 36.47 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/355/GCA_000177355.1_ASM17735v1 | ||
| CDS | 2034 | ||
| Genes | 2099 | ||
| mRNA | 2099 | ||
| misc RNA | 14 | ||
| rRNA | 4 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.33 % | ||
| CheckM Completeness | 98.26 % | ||
| CheckM Contamination | 0.09 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM17735v1 |
| GenBank Assembly Accession | GCA_000177355.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000177355.1 [NCBI] |
| BioSample | SAMN00003364 [NCBI] |
| BioProject | PRJNA40671 [NCBI] |
| Submitter | JCVI |
| Submission Date | 2009-10-05T14:39:18.190 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ADFQ01 |
| NCBI TaxID | 679191 |
| Isolation Source | amniotic fluid |
| Geo Location | not determined |
