Genome Meta Information: Megasphaera lornae 28L (GCA_000177555.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000177555.1 | ||
| HOMD Taxon-ID | HMT-0841 | ||
| Species Name (in use by HOMD) | Megasphaera lornae | ||
| Organism Name (as deposited) | HMT-841 Megasphaera lornae 28L | ||
| Strain or Isolate | 28L | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Megasphaeraceae;g__Megasphaera_C; s__Megasphaera_C lornae |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 1,726,197 (bp) | ||
| GC Percentage | 46.05 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/555/GCA_000177555.1_ASM17755v1 | ||
| CDS | 1537 | ||
| Genes | 1614 | ||
| mRNA | 1614 | ||
| misc RNA | 24 | ||
| rRNA | 3 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.17 % | ||
| CheckM Completeness | 99.9 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM17755v1 |
| GenBank Assembly Accession | GCA_000177555.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000177555.1 [NCBI] |
| BioSample | SAMN00006220 [NCBI] |
| BioProject | PRJNA42553 [NCBI] |
| Submitter | JCVI |
| Submission Date | 2009-12-14T16:20:06.456 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ADGP01 |
| NCBI TaxID | 1000568 |
| Isolation Source | missing |
| Geo Location | not determined |
