Taxon Table | Genome Table
Genome Meta Information:
Peptoniphilus
lacrimalis
F0141 (GCA_000179335.1)
| HOMD Genome-ID |
GCA_000179335.1
|
| HOMD Taxon-ID |
HMT-0836
|
| Species Name (in use by HOMD) |
Peptoniphilus lacrimalis
|
| Organism Name (as deposited) |
HMT-836 Peptoniphilus lacrimalis F0141
|
| Strain or Isolate |
F0141
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus_A;
s__Peptoniphilus_A lacrimalis |
| Sequencing Technology |
454
|
| Genome Coverage |
18
|
| Contigs |
Number of Contigs: 145
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
1,625,156 (bp) |
| GC Percentage |
30.33
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/335/GCA_000179335.1_ASM17933v1
|
| CDS |
1543
|
| Genes |
1606
|
| mRNA |
1606
|
| misc RNA |
23
|
| rRNA |
3
|
| tRNA |
36
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
95.28 %
|
| CheckM Contamination |
1.01 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM17933v1
|
| GenBank Assembly Accession |
GCA_000179335.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_000179335.1
[NCBI]
|
| BioSample |
SAMN00031762
[NCBI]
|
| BioProject |
PRJNA49437
[NCBI]
|
| Submitter |
J. Craig Venter Institute
|
| Submission Date |
2010-08-06T11:53:03.910
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
AEAA01
|
| NCBI TaxID |
768724
|
| Isolation Source |
missing
|
| Geo Location |
not determined
|
