Genome Meta Information: Segatella buccae ATCC 33574 (GCA_000184945.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000184945.1 | ||
| HOMD Taxon-ID | HMT-0560 | ||
| Species Name (in use by HOMD) | Segatella buccae | ||
| Organism Name (as deposited) | HMT-560 Segatella buccae ATCC 33574 | ||
| Strain or Isolate | ATCC 33574 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella buccae |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 19.9 | ||
| Contigs |
|
||
| Total Sequence Length | 3,284,105 (bp) | ||
| GC Percentage | 51.93 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/945/GCA_000184945.1_ASM18494v1 | ||
| CDS | 2617 | ||
| Genes | 2679 | ||
| mRNA | 2679 | ||
| misc RNA | 6 | ||
| rRNA | 4 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.1 % | ||
| CheckM Contamination | 0.95 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM18494v1 |
| GenBank Assembly Accession | GCA_000184945.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000184945.1 [NCBI] |
| BioSample | SAMN00216833 [NCBI] |
| BioProject | PRJNA51491 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2011-03-01T11:34:07.013 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AEPD01 |
| NCBI TaxID | 873513 |
| Isolation Source | "oral, gingival crevices" |
| Geo Location | not determined |
