Genome Meta Information: Lachnoanaerobaculum saburreum DSM 3986 (GCA_000185385.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000185385.1 | ||
| HOMD Taxon-ID | HMT-0494 | ||
| Species Name (in use by HOMD) | Lachnoanaerobaculum saburreum | ||
| Organism Name (as deposited) | HMT-494 Lachnoanaerobaculum saburreum DSM 3986 | ||
| Strain or Isolate | DSM 3986 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Lachnoanaerobaculum; s__Lachnoanaerobaculum saburreum |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 31.1 | ||
| Contigs |
|
||
| Total Sequence Length | 3,082,404 (bp) | ||
| GC Percentage | 38.77 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/385/GCA_000185385.1_ASM18538v1 | ||
| CDS | 2821 | ||
| Genes | 2889 | ||
| mRNA | 2889 | ||
| misc RNA | 16 | ||
| rRNA | 2 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 96.31 % | ||
| CheckM Contamination | 0.22 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM18538v1 |
| GenBank Assembly Accession | GCA_000185385.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000185385.1 [NCBI] |
| BioSample | SAMN00216780 [NCBI] |
| BioProject | PRJNA52981 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2011-02-25T17:38:04.000 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AEPW01 |
| NCBI TaxID | 887325 |
| Isolation Source | oral cavity |
| Geo Location | not determined |
