Genome Meta Information: Pseudoramibacter alactolyticus ATCC 23263 (GCA_000185505.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000185505.1 | ||
| HOMD Taxon-ID | HMT-0538 | ||
| Species Name (in use by HOMD) | Pseudoramibacter alactolyticus | ||
| Organism Name (as deposited) | HMT-538 Pseudoramibacter alactolyticus ATCC 23263 | ||
| Strain or Isolate | ATCC 23263 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Eubacteriales;f__Eubacteriaceae;g__Pseudoramibacter; s__Pseudoramibacter alactolyticus |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 34.79 | ||
| Contigs |
|
||
| Total Sequence Length | 2,362,882 (bp) | ||
| GC Percentage | 52.36 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/505/GCA_000185505.1_ASM18550v1 | ||
| CDS | 2209 | ||
| Genes | 2291 | ||
| mRNA | 2291 | ||
| misc RNA | 26 | ||
| rRNA | 6 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 3 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM18550v1 |
| GenBank Assembly Accession | GCA_000185505.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000185505.1 [NCBI] |
| BioSample | SAMN00260151 [NCBI] |
| BioProject | PRJNA52995 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2011-04-21T16:35:08.647 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AEQN01 |
| NCBI TaxID | 887929 |
| Isolation Source | oral cavity |
| Geo Location | not determined |
