Genome Meta Information: Segatella salivae DSM 15606 (GCA_000185845.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000185845.1 | ||
| HOMD Taxon-ID | HMT-0307 | ||
| Species Name (in use by HOMD) | Segatella salivae | ||
| Organism Name (as deposited) | HMT-307 Segatella salivae DSM 15606 | ||
| Strain or Isolate | DSM 15606 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella salivae |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 18.9 | ||
| Contigs |
|
||
| Total Sequence Length | 3,274,581 (bp) | ||
| GC Percentage | 43.78 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/845/GCA_000185845.1_ASM18584v1 | ||
| CDS | 2662 | ||
| Genes | 2724 | ||
| mRNA | 2724 | ||
| misc RNA | 9 | ||
| rRNA | 3 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 97.78 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM18584v1 |
| GenBank Assembly Accession | GCA_000185845.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000185845.1 [NCBI] |
| BioSample | SAMN00216886 [NCBI] |
| BioProject | PRJNA53199 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2011-03-01T14:41:07.530 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AEQO01 |
| NCBI TaxID | 888832 |
| Isolation Source | "gastrointestinal tract, foregut" |
| Geo Location | not determined |
