Genome Meta Information: Parascardovia denticolens DSM 10105 (GCA_000191785.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000191785.1 | ||
| HOMD Taxon-ID | HMT-0586 | ||
| Species Name (in use by HOMD) | Parascardovia denticolens | ||
| Organism Name (as deposited) | HMT-586 Parascardovia denticolens DSM 10105 | ||
| Strain or Isolate | DSM 10105 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Scardovia; s__Scardovia denticolens |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 99.8 | ||
| Contigs |
|
||
| Total Sequence Length | 1,891,448 (bp) | ||
| GC Percentage | 58.32 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/785/GCA_000191785.1_ASM19178v1 | ||
| CDS | 1522 | ||
| Genes | 1577 | ||
| mRNA | 1577 | ||
| misc RNA | 5 | ||
| rRNA | 4 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 97.83 % | ||
| CheckM Contamination | 0.17 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM19178v1 |
| GenBank Assembly Accession | GCA_000191785.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000191785.1 [NCBI] |
| BioSample | SAMN02299441 [NCBI] |
| BioProject | PRJNA50509 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2013-08-02T12:07:40.880 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | AEON01 |
| NCBI TaxID | 864564 |
| Isolation Source | oral cavity |
| Geo Location | not determined |
