Genome Meta Information: Prevotella denticola F0289 (GCA_000193395.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000193395.1 | ||
| HOMD Taxon-ID | HMT-0291 | ||
| Species Name (in use by HOMD) | Prevotella denticola | ||
| Organism Name (as deposited) | HMT-291 Prevotella denticola F0289 | ||
| Strain or Isolate | F0289 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella denticola |
||
| Sequencing Technology | 454; Illumina | ||
| Genome Coverage | 43 | ||
| Contigs |
|
||
| Total Sequence Length | 2,937,589 (bp) | ||
| GC Percentage | 50.36 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/395/GCA_000193395.1_ASM19339v1 | ||
| CDS | 2349 | ||
| Genes | 2421 | ||
| mRNA | 2421 | ||
| misc RNA | 8 | ||
| rRNA | 12 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.17 % | ||
| CheckM Completeness | 97.54 % | ||
| CheckM Contamination | 1.73 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM19339v1 |
| GenBank Assembly Accession | GCA_000193395.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000193395.1 [NCBI] |
| BioSample | SAMN00031760 [NCBI] |
| BioProject | PRJNA49293 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2010-08-06T11:51:03.853 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 767031 |
| Isolation Source | |
| Geo Location | not determined |
