Genome Meta Information: Oribacterium asaccharolyticum F0425 (GCA_000214455.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000214455.2 | ||
| HOMD Taxon-ID | HMT-0108 | ||
| Species Name (in use by HOMD) | Oribacterium asaccharolyticum | ||
| Organism Name (as deposited) | HMT-108 Oribacterium asaccharolyticum F0425 | ||
| Strain or Isolate | F0425 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Oribacterium; s__Oribacterium asaccharolyticum |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 23.05 | ||
| Contigs |
|
||
| Total Sequence Length | 2,518,361 (bp) | ||
| GC Percentage | 43.25 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/455/GCA_000214455.2_ASM21445v1 | ||
| CDS | 2273 | ||
| Genes | 2351 | ||
| mRNA | 2351 | ||
| misc RNA | 20 | ||
| rRNA | 11 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 96.42 % | ||
| CheckM Contamination | 0.71 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM21445v1 |
| GenBank Assembly Accession | GCA_000214455.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000214455.1 [NCBI] |
| BioSample | SAMN00115116 [NCBI] |
| BioProject | PRJNA53571 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2010-10-08T15:22:04.737 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AFIH01 |
| NCBI TaxID | 904296 |
| Isolation Source | |
| Geo Location | not determined |
