Genome Meta Information: Megasphaera lornae UPII 199-6 (GCA_000214495.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000214495.2 | ||
| HOMD Taxon-ID | HMT-0841 | ||
| Species Name (in use by HOMD) | Megasphaera lornae | ||
| Organism Name (as deposited) | HMT-841 Megasphaera lornae UPII 199-6 | ||
| Strain or Isolate | UPII 199-6 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Megasphaeraceae;g__Megasphaera_C; s__Megasphaera_C lornae |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 57.36 | ||
| Contigs |
|
||
| Total Sequence Length | 1,640,787 (bp) | ||
| GC Percentage | 46.37 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/495/GCA_000214495.2_ASM21449v1 | ||
| CDS | 1476 | ||
| Genes | 1553 | ||
| mRNA | 1553 | ||
| misc RNA | 24 | ||
| rRNA | 3 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.48 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM21449v1 |
| GenBank Assembly Accession | GCA_000214495.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000214495.1 [NCBI] |
| BioSample | SAMN00255229 [NCBI] |
| BioProject | PRJNA64689 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2011-04-07T16:01:08.450 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AFIJ01 |
| NCBI TaxID | 1000568 |
| Isolation Source | |
| Geo Location | not determined |
