Genome Meta Information: Prevotella pallens ATCC 700821 (GCA_000220255.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000220255.1 | ||
| HOMD Taxon-ID | HMT-0714 | ||
| Species Name (in use by HOMD) | Prevotella pallens | ||
| Organism Name (as deposited) | HMT-714 Prevotella pallens ATCC 700821 | ||
| Strain or Isolate | ATCC 700821 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella pallens |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 32.92 | ||
| Contigs |
|
||
| Total Sequence Length | 3,127,600 (bp) | ||
| GC Percentage | 39.07 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/255/GCA_000220255.1_ASM22025v1 | ||
| CDS | 2550 | ||
| Genes | 2606 | ||
| mRNA | 2606 | ||
| misc RNA | 8 | ||
| rRNA | 2 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.94 % | ||
| CheckM Completeness | 99.29 % | ||
| CheckM Contamination | 0.44 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM22025v1 |
| GenBank Assembly Accession | GCA_000220255.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000220255.1 [NCBI] |
| BioSample | SAMN00262640 [NCBI] |
| BioProject | PRJNA64739 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2011-04-29T22:24:06.753 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AFPY01 |
| NCBI TaxID | 997353 |
| Isolation Source | |
| Geo Location | not determined |
