Genome Meta Information: Neisseria macacae ATCC 33926 (GCA_000220865.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000220865.1 | ||
| HOMD Taxon-ID | HMT-0099 | ||
| Species Name (in use by HOMD) | Neisseria macacae | ||
| Organism Name (as deposited) | HMT-099 Neisseria macacae ATCC 33926 | ||
| Strain or Isolate | ATCC 33926 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria macacae |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 22.47 | ||
| Contigs |
|
||
| Total Sequence Length | 2,748,368 (bp) | ||
| GC Percentage | 52.37 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/865/GCA_000220865.1_ASM22086v1 | ||
| CDS | 2453 | ||
| Genes | 2532 | ||
| mRNA | 2532 | ||
| misc RNA | 19 | ||
| rRNA | 3 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.94 % | ||
| CheckM Completeness | 96.92 % | ||
| CheckM Contamination | 0.27 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM22086v1 |
| GenBank Assembly Accession | GCA_000220865.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000220865.1 [NCBI] |
| BioSample | SAMN02299447 [NCBI] |
| BioProject | PRJNA64729 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2013-08-02T12:07:41.436 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AFQE01 |
| NCBI TaxID | 997348 |
| Isolation Source | |
| Geo Location | not determined |
