Genome Meta Information: Staphylococcus capitis VCU116 (GCA_000221525.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000221525.2 | ||
| HOMD Taxon-ID | HMT-0116 | ||
| Species Name (in use by HOMD) | Staphylococcus capitis | ||
| Organism Name (as deposited) | HMT-116 Staphylococcus capitis VCU116 | ||
| Strain or Isolate | VCU116 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus capitis |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 24 | ||
| Contigs |
|
||
| Total Sequence Length | 2,452,574 (bp) | ||
| GC Percentage | 32.85 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/525/GCA_000221525.2_ASM22152v2 | ||
| CDS | 2376 | ||
| Genes | 2489 | ||
| mRNA | 2489 | ||
| misc RNA | 54 | ||
| rRNA | 5 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.97 % | ||
| CheckM Completeness | 98.28 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM22152v2 |
| GenBank Assembly Accession | GCA_000221525.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000221525.1 [NCBI] |
| BioSample | SAMN00116853 [NCBI] |
| BioProject | PRJNA53751 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2010-10-29T11:52:04.253 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AFTX01 |
| NCBI TaxID | 904334 |
| Isolation Source | |
| Geo Location | |
