Genome Meta Information: Haemophilus haemolyticus M21127 (GCA_000222045.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000222045.2 | ||
| HOMD Taxon-ID | HMT-0851 | ||
| Species Name (in use by HOMD) | Haemophilus haemolyticus | ||
| Organism Name (as deposited) | HMT-851 Haemophilus haemolyticus M21127 | ||
| Strain or Isolate | M21127 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus; s__Haemophilus haemolyticus_N |
||
| Sequencing Technology | 454 GS-FLX | ||
| Genome Coverage | 20 | ||
| Contigs |
|
||
| Total Sequence Length | 1,945,624 (bp) | ||
| GC Percentage | 38.57 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/045/GCA_000222045.2_ASM22204v2 | ||
| CDS | 1890 | ||
| Genes | 2020 | ||
| mRNA | 2020 | ||
| misc RNA | 63 | ||
| rRNA | 12 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.6 % | ||
| CheckM Completeness | 94.38 % | ||
| CheckM Contamination | 0.94 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM22204v2 |
| GenBank Assembly Accession | GCA_000222045.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000222045.1 [NCBI] |
| BioSample | SAMN02952885 [NCBI] |
| BioProject | PRJNA66575 [NCBI] |
| Submitter | Meningitis and Vaccine Preventable Diseases Branch, Centers for Disease Control and Prevention |
| Submission Date | 2014-08-05T16:01:18.390 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AFQP01 |
| NCBI TaxID | 1028804 |
| Isolation Source | blood |
| Geo Location | USA: Georgia |
