Genome Meta Information: Haemophilus pittmaniae HK 85 (GCA_000223275.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000223275.2 | ||
| HOMD Taxon-ID | HMT-0946 | ||
| Species Name (in use by HOMD) | Haemophilus pittmaniae | ||
| Organism Name (as deposited) | HMT-946 Haemophilus pittmaniae HK 85 | ||
| Strain or Isolate | HK 85 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus_D; s__Haemophilus_D pittmaniae |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 21.08 | ||
| Contigs |
|
||
| Total Sequence Length | 2,182,608 (bp) | ||
| GC Percentage | 42.54 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/275/GCA_000223275.2_ASM22327v1 | ||
| CDS | 2348 | ||
| Genes | 2464 | ||
| mRNA | 2464 | ||
| misc RNA | 28 | ||
| rRNA | 26 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.91 % | ||
| CheckM Completeness | 78.11 % | ||
| CheckM Contamination | 1.61 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM22327v1 |
| GenBank Assembly Accession | GCA_000223275.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000223275.1 [NCBI] |
| BioSample | SAMN00621708 [NCBI] |
| BioProject | PRJNA67189 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2011-05-26T16:55:06.867 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AFUV01 |
| NCBI TaxID | 1035188 |
| Isolation Source | |
| Geo Location | not determined |
