Genome Meta Information: Parvimonas sp. HMT-393 F0440 (GCA_000223315.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000223315.2 | ||
| HOMD Taxon-ID | HMT-0393 | ||
| Species Name (in use by HOMD) | Parvimonas sp. HMT-393 | ||
| Organism Name (as deposited) | HMT-393 Parvimonas sp. HMT-393 F0440 | ||
| Strain or Isolate | F0440 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Parvimonas; s__Parvimonas sp000223315 |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 26.35 | ||
| Contigs |
|
||
| Total Sequence Length | 1,483,165 (bp) | ||
| GC Percentage | 28.17 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/315/GCA_000223315.2_ASM22331v1 | ||
| CDS | 1616 | ||
| Genes | 1701 | ||
| mRNA | 1701 | ||
| misc RNA | 33 | ||
| rRNA | 10 | ||
| tRNA | 41 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 87.49 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM22331v1 |
| GenBank Assembly Accession | GCA_000223315.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000223315.1 [NCBI] |
| BioSample | SAMN00195327 [NCBI] |
| BioProject | PRJNA61837 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2011-01-21T14:36:03.807 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AFUS01 |
| NCBI TaxID | 944565 |
| Isolation Source | |
| Geo Location | not determined |
