Genome Meta Information: Prevotella jejuni C561 (GCA_000224595.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000224595.1 | ||
| HOMD Taxon-ID | HMT-0313 | ||
| Species Name (in use by HOMD) | Prevotella jejuni | ||
| Organism Name (as deposited) | HMT-313 Prevotella jejuni C561 | ||
| Strain or Isolate | C561 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella jejuni |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 31 | ||
| Contigs |
|
||
| Total Sequence Length | 4,031,149 (bp) | ||
| GC Percentage | 42.32 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/595/GCA_000224595.1_Prevotella_sp_C561_V1 | ||
| CDS | 3287 | ||
| Genes | 3360 | ||
| mRNA | 3360 | ||
| misc RNA | 12 | ||
| rRNA | 8 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.93 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Prevotella_sp_C561_V1 |
| GenBank Assembly Accession | GCA_000224595.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000224595.1 [NCBI] |
| BioSample | SAMN02463828 [NCBI] |
| BioProject | PRJNA41971 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:44.023 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ADCT01 |
| NCBI TaxID | 563031 |
| Isolation Source | missing |
| Geo Location | not determined |
