Genome Meta Information: Segatella oulorum F0390 (GCA_000224615.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000224615.1 | ||
| HOMD Taxon-ID | HMT-0288 | ||
| Species Name (in use by HOMD) | Segatella oulorum | ||
| Organism Name (as deposited) | HMT-288 Segatella oulorum F0390 | ||
| Strain or Isolate | F0390 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella oulorum |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 44 | ||
| Contigs |
|
||
| Total Sequence Length | 2,805,893 (bp) | ||
| GC Percentage | 47.11 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/615/GCA_000224615.1_Prev_oulo_F0390_V1 | ||
| CDS | 2450 | ||
| Genes | 2517 | ||
| mRNA | 2517 | ||
| misc RNA | 9 | ||
| rRNA | 5 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.25 % | ||
| CheckM Completeness | 98.55 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Prev_oulo_F0390_V1 |
| GenBank Assembly Accession | GCA_000224615.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000224615.1 [NCBI] |
| BioSample | SAMN02463847 [NCBI] |
| BioProject | PRJNA43117 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:46.036 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ADGI01 |
| NCBI TaxID | 702438 |
| Isolation Source | missing |
| Geo Location | not determined |
