Genome Meta Information: Olsenella phocaeensis F0356 (GCA_000233535.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000233535.1 | ||
| HOMD Taxon-ID | HMT-0809 | ||
| Species Name (in use by HOMD) | Olsenella phocaeensis | ||
| Organism Name (as deposited) | HMT-809 Olsenella phocaeensis F0356 | ||
| Strain or Isolate | F0356 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Olsenella_I; s__Olsenella_I phocaeensis |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 52 | ||
| Contigs |
|
||
| Total Sequence Length | 2,163,862 (bp) | ||
| GC Percentage | 66.48 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/535/GCA_000233535.1_Olsenella_sp_F0356_V1 | ||
| CDS | 1886 | ||
| Genes | 1948 | ||
| mRNA | 1948 | ||
| misc RNA | 10 | ||
| rRNA | 3 | ||
| tRNA | 49 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.62 % | ||
| CheckM Contamination | 0.65 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Olsenella_sp_F0356_V1 |
| GenBank Assembly Accession | GCA_000233535.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000233535.1 [NCBI] |
| BioSample | SAMN02463784 [NCBI] |
| BioProject | PRJNA39743 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:39.230 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACVE01 |
| NCBI TaxID | 661087 |
| Isolation Source | oral cavity |
| Geo Location | not determined |
