Genome Meta Information: Oribacterium parvum ACB1 (GCA_000238055.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000238055.2 | ||
| HOMD Taxon-ID | HMT-0934 | ||
| Species Name (in use by HOMD) | Oribacterium parvum | ||
| Organism Name (as deposited) | HMT-934 Oribacterium parvum ACB1 | ||
| Strain or Isolate | ACB1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Oribacterium; s__Oribacterium parvum |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 37 | ||
| Contigs |
|
||
| Total Sequence Length | 2,470,863 (bp) | ||
| GC Percentage | 42.18 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/055/GCA_000238055.2_Oribacterium_sp_ACB1_V2 | ||
| CDS | 2127 | ||
| Genes | 2213 | ||
| mRNA | 2213 | ||
| misc RNA | 23 | ||
| rRNA | 13 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.34 % | ||
| CheckM Contamination | 0.47 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Oribacterium_sp_ACB1_V2 |
| GenBank Assembly Accession | GCA_000238055.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000238055.2 [NCBI] |
| BioSample | SAMN02463872 [NCBI] |
| BioProject | PRJNA49877 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:48.766 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AFZC02 |
| NCBI TaxID | 796943 |
| Isolation Source | |
| Geo Location | not determined |
