Genome Meta Information: Tannerella forsythia 92A2 (GCA_000238215.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000238215.1 | ||
| HOMD Taxon-ID | HMT-0613 | ||
| Species Name (in use by HOMD) | Tannerella forsythia | ||
| Organism Name (as deposited) | HMT-613 Tannerella forsythia 92A2 | ||
| Strain or Isolate | 92A2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Tannerella; s__Tannerella forsythia |
||
| Sequencing Technology | Sanger | ||
| Genome Coverage | 12 | ||
| Contigs |
|
||
| Total Sequence Length | 3,405,521 (bp) | ||
| GC Percentage | 46.98 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/215/GCA_000238215.1_ASM23821v1 | ||
| CDS | 2843 | ||
| Genes | 2923 | ||
| mRNA | 2923 | ||
| misc RNA | 27 | ||
| rRNA | 6 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.67 % | ||
| CheckM Completeness | 99.33 % | ||
| CheckM Contamination | 0.91 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM23821v1 |
| GenBank Assembly Accession | GCA_000238215.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000238215.1 [NCBI] |
| BioSample | SAMN02604009 [NCBI] |
| BioProject | PRJNA319 [NCBI] |
| Submitter | TIGR |
| Submission Date | 2014-01-30T14:54:15.157 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 203275 |
| Isolation Source | periodontal pocket |
| Geo Location | USA: Massachusetts |
