Genome Meta Information: Lentilactobacillus kisonensis F0435 (GCA_000242275.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000242275.1 | ||
| HOMD Taxon-ID | HMT-0424 | ||
| Species Name (in use by HOMD) | Lentilactobacillus kisonensis | ||
| Organism Name (as deposited) | HMT-424 Lentilactobacillus kisonensis F0435 | ||
| Strain or Isolate | F0435 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lentilactobacillus; s__Lentilactobacillus kisonensis |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 191.6 | ||
| Contigs |
|
||
| Total Sequence Length | 2,987,059 (bp) | ||
| GC Percentage | 41.99 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/275/GCA_000242275.1_ASM24227v1 | ||
| CDS | 2977 | ||
| Genes | 3063 | ||
| mRNA | 3063 | ||
| misc RNA | 38 | ||
| rRNA | 3 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.6 % | ||
| CheckM Completeness | 88.99 % | ||
| CheckM Contamination | 0.09 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM24227v1 |
| GenBank Assembly Accession | GCA_000242275.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000242275.1 [NCBI] |
| BioSample | SAMN02299436 [NCBI] |
| BioProject | PRJNA49693 [NCBI] |
| Submitter | Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine |
| Submission Date | 2013-08-02T12:07:40.450 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AGRJ01 |
| NCBI TaxID | 797516 |
| Isolation Source | |
| Geo Location | not determined |
