Genome Meta Information: Haemophilus haemolyticus F0397 (GCA_000242295.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000242295.1 | ||
| HOMD Taxon-ID | HMT-0851 | ||
| Species Name (in use by HOMD) | Haemophilus haemolyticus | ||
| Organism Name (as deposited) | HMT-851 Haemophilus haemolyticus F0397 | ||
| Strain or Isolate | F0397 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus; s__Haemophilus sp000242295 |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 257 | ||
| Contigs |
|
||
| Total Sequence Length | 1,838,618 (bp) | ||
| GC Percentage | 38.34 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/295/GCA_000242295.1_ASM24229v1 | ||
| CDS | 1715 | ||
| Genes | 1791 | ||
| mRNA | 1791 | ||
| misc RNA | 29 | ||
| rRNA | 4 | ||
| tRNA | 42 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.57 % | ||
| CheckM Contamination | 0.21 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM24229v1 |
| GenBank Assembly Accession | GCA_000242295.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000242295.1 [NCBI] |
| BioSample | SAMN02299433 [NCBI] |
| BioProject | PRJNA48495 [NCBI] |
| Submitter | Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine |
| Submission Date | 2013-08-02T12:07:40.170 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AGRK01 |
| NCBI TaxID | 762965 |
| Isolation Source | |
| Geo Location | not determined |
