Genome Meta Information: Segatella maculosa OT 289 (GCA_000243015.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000243015.1 | ||
| HOMD Taxon-ID | HMT-0289 | ||
| Species Name (in use by HOMD) | Segatella maculosa | ||
| Organism Name (as deposited) | HMT-289 Segatella maculosa OT 289 | ||
| Strain or Isolate | OT 289 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella maculosa |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 300 | ||
| Contigs |
|
||
| Total Sequence Length | 3,151,214 (bp) | ||
| GC Percentage | 47.99 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/015/GCA_000243015.1_Prev_macu_OT_289_V1 | ||
| CDS | 2560 | ||
| Genes | 2624 | ||
| mRNA | 2624 | ||
| misc RNA | 7 | ||
| rRNA | 6 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.24 % | ||
| CheckM Completeness | 98.99 % | ||
| CheckM Contamination | 1.64 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Prev_macu_OT_289_V1 |
| GenBank Assembly Accession | GCA_000243015.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000243015.1 [NCBI] |
| BioSample | SAMN02463943 [NCBI] |
| BioProject | PRJNA64895 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:58.066 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AGEK01 |
| NCBI TaxID | 999422 |
| Isolation Source | |
| Geo Location | not determined |
