Genome Meta Information: Prevotella micans F0438 (GCA_000243035.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000243035.1 | ||
| HOMD Taxon-ID | HMT-0378 | ||
| Species Name (in use by HOMD) | Prevotella micans | ||
| Organism Name (as deposited) | HMT-378 Prevotella micans F0438 | ||
| Strain or Isolate | F0438 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella micans |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 51 | ||
| Contigs |
|
||
| Total Sequence Length | 2,487,950 (bp) | ||
| GC Percentage | 45.96 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/035/GCA_000243035.1_Prev_mica_F0438_V1 | ||
| CDS | 2027 | ||
| Genes | 2084 | ||
| mRNA | 2084 | ||
| misc RNA | 5 | ||
| rRNA | 6 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.97 % | ||
| CheckM Completeness | 97.04 % | ||
| CheckM Contamination | 0.52 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Prev_mica_F0438_V1 |
| GenBank Assembly Accession | GCA_000243035.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000243035.1 [NCBI] |
| BioSample | SAMN02463881 [NCBI] |
| BioProject | PRJNA52087 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:49.987 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AGWK01 |
| NCBI TaxID | 883158 |
| Isolation Source | |
| Geo Location | not determined |
