Genome Meta Information: Prevotella vespertina F0472 (GCA_000257925.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000257925.1 | ||
| HOMD Taxon-ID | HMT-0306 | ||
| Species Name (in use by HOMD) | Prevotella vespertina | ||
| Organism Name (as deposited) | HMT-306 Prevotella vespertina F0472 | ||
| Strain or Isolate | F0472 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella vespertina |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 135 | ||
| Contigs |
|
||
| Total Sequence Length | 2,945,767 (bp) | ||
| GC Percentage | 41.32 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/925/GCA_000257925.1_PspF0472v1.0 | ||
| CDS | 2465 | ||
| Genes | 2532 | ||
| mRNA | 2532 | ||
| misc RNA | 10 | ||
| rRNA | 7 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.29 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | PspF0472v1.0 |
| GenBank Assembly Accession | GCA_000257925.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000257925.1 [NCBI] |
| BioSample | SAMN00761833 [NCBI] |
| BioProject | PRJNA75153 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2011-12-05T15:24:04.807 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AJIN01 |
| NCBI TaxID | 1095752 |
| Isolation Source | |
| Geo Location | not determined |
