Genome Meta Information: Rothia aeria F0474 (GCA_000258205.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000258205.1 | ||
| HOMD Taxon-ID | HMT-0188 | ||
| Species Name (in use by HOMD) | Rothia aeria | ||
| Organism Name (as deposited) | HMT-188 Rothia aeria F0474 | ||
| Strain or Isolate | F0474 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia; s__Rothia aeria |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 35 | ||
| Contigs |
|
||
| Total Sequence Length | 2,584,293 (bp) | ||
| GC Percentage | 56.67 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/205/GCA_000258205.1_RaeriaF0474v1.0 | ||
| CDS | 2239 | ||
| Genes | 2301 | ||
| mRNA | 2301 | ||
| misc RNA | 13 | ||
| rRNA | 2 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.41 % | ||
| CheckM Completeness | 99.14 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | RaeriaF0474v1.0 |
| GenBank Assembly Accession | GCA_000258205.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000258205.1 [NCBI] |
| BioSample | SAMN00792226 [NCBI] |
| BioProject | PRJNA78909 [NCBI] |
| Submitter | |
| Submission Date | 2012-02-23T16:16:16.900 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AJJQ01 |
| NCBI TaxID | 1125724 |
| Isolation Source | |
| Geo Location | not determined |
