Taxon Table | Genome Table
Genome Meta Information:
Neisseria
sicca
VK64 (GCA_000260655.1)
| HOMD Genome-ID |
GCA_000260655.1
|
| HOMD Taxon-ID |
HMT-0764
|
| Species Name (in use by HOMD) |
Neisseria sicca
|
| Organism Name (as deposited) |
HMT-764 Neisseria sicca VK64
|
| Strain or Isolate |
VK64
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria;
s__Neisseria sicca_B |
| Sequencing Technology |
Illumina
|
| Genome Coverage |
161.16
|
| Contigs |
Number of Contigs: 210
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,638,449 (bp) |
| GC Percentage |
51.2
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/655/GCA_000260655.1_NsiccaVK64v1.0
|
| CDS |
2394
|
| Genes |
2459
|
| mRNA |
2459
|
| misc RNA |
18
|
| rRNA |
1
|
| tRNA |
45
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
96.81 %
|
| CheckM Completeness |
97.74 %
|
| CheckM Contamination |
0.65 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
NsiccaVK64v1.0
|
| GenBank Assembly Accession |
GCA_000260655.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_000260655.1
[NCBI]
|
| BioSample |
SAMN00761806
[NCBI]
|
| BioProject |
PRJNA75141
[NCBI]
|
| Submitter |
J. Craig Venter Institute
|
| Submission Date |
2011-12-05T14:46:04.407
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
AJMT01
|
| NCBI TaxID |
1095748
|
| Isolation Source |
|
| Geo Location |
not determined
|
