Genome Meta Information: Haemophilus haemolyticus HK386 (GCA_000262285.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000262285.1 | ||
| HOMD Taxon-ID | HMT-0851 | ||
| Species Name (in use by HOMD) | Haemophilus haemolyticus | ||
| Organism Name (as deposited) | HMT-851 Haemophilus haemolyticus HK386 | ||
| Strain or Isolate | HK386 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus; s__Haemophilus haemolyticus |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 32.91 | ||
| Contigs |
|
||
| Total Sequence Length | 1,822,726 (bp) | ||
| GC Percentage | 38.54 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/285/GCA_000262285.1_ASM26228v1 | ||
| CDS | 1701 | ||
| Genes | 1771 | ||
| mRNA | 1771 | ||
| misc RNA | 27 | ||
| rRNA | 3 | ||
| tRNA | 39 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 97.75 % | ||
| CheckM Contamination | 0.03 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM26228v1 |
| GenBank Assembly Accession | GCA_000262285.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000262285.1 [NCBI] |
| BioSample | SAMN00761814 [NCBI] |
| BioProject | PRJNA75145 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2011-12-05T15:01:06.233 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AJSV01 |
| NCBI TaxID | 1095742 |
| Isolation Source | |
| Geo Location | not determined |
