Genome Meta Information: Prevotella bivia DSM 20514 (GCA_000262545.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000262545.1 | ||
| HOMD Taxon-ID | HMT-0556 | ||
| Species Name (in use by HOMD) | Prevotella bivia | ||
| Organism Name (as deposited) | HMT-556 Prevotella bivia DSM 20514 | ||
| Strain or Isolate | DSM 20514 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella bivia |
||
| Sequencing Technology | 454; Illumina | ||
| Genome Coverage | 30 | ||
| Contigs |
|
||
| Total Sequence Length | 2,521,238 (bp) | ||
| GC Percentage | 39.89 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/545/GCA_000262545.1_ASM26254v1 | ||
| CDS | 2138 | ||
| Genes | 2214 | ||
| mRNA | 2214 | ||
| misc RNA | 13 | ||
| rRNA | 12 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.97 % | ||
| CheckM Completeness | 96.63 % | ||
| CheckM Contamination | 1.14 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM26254v1 |
| GenBank Assembly Accession | GCA_000262545.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000262545.1 [NCBI] |
| BioSample | SAMN02261368 [NCBI] |
| BioProject | PRJNA50753 [NCBI] |
| Submitter | JGI |
| Submission Date | 2013-07-19T14:58:27.283 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AJVZ01 |
| NCBI TaxID | 868129 |
| Isolation Source | Endometrium |
| Geo Location | Missing |
