Genome Meta Information: Scardovia wiggsiae F0424 (GCA_000275805.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000275805.1 | ||
| HOMD Taxon-ID | HMT-0195 | ||
| Species Name (in use by HOMD) | Scardovia wiggsiae | ||
| Organism Name (as deposited) | HMT-195 Scardovia wiggsiae F0424 | ||
| Strain or Isolate | F0424 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Scardovia; s__Scardovia wiggsiae |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 200 | ||
| Contigs |
|
||
| Total Sequence Length | 1,555,498 (bp) | ||
| GC Percentage | 53.06 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/805/GCA_000275805.1_Scar_wigg_F0424_V1 | ||
| CDS | 1243 | ||
| Genes | 1303 | ||
| mRNA | 1303 | ||
| misc RNA | 7 | ||
| rRNA | 6 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.93 % | ||
| CheckM Completeness | 92.96 % | ||
| CheckM Contamination | 0.14 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Scar_wigg_F0424_V1 |
| GenBank Assembly Accession | GCA_000275805.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000275805.1 [NCBI] |
| BioSample | SAMN02463874 [NCBI] |
| BioProject | PRJNA49881 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:48.967 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AGZS01 |
| NCBI TaxID | 857290 |
| Isolation Source | |
| Geo Location | not determined |
