Genome Meta Information: Caldilinea aerophila DSM 14535 (GCA_000281175.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000281175.1 | ||
| HOMD Taxon-ID | HMT-0994 | ||
| Species Name (in use by HOMD) | Caldilinea aerophila | ||
| Organism Name (as deposited) | HMT-994 Caldilinea aerophila DSM 14535 | ||
| Strain or Isolate | DSM 14535 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__Caldilinea; s__Caldilinea aerophila |
||
| Sequencing Technology | Sanger ABI 3730 | ||
| Genome Coverage | 9 | ||
| Contigs |
|
||
| Total Sequence Length | 5,144,873 (bp) | ||
| GC Percentage | 58.77 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/175/GCA_000281175.1_ASM28117v1 | ||
| CDS | 4129 | ||
| Genes | 4202 | ||
| mRNA | 4202 | ||
| misc RNA | 18 | ||
| rRNA | 6 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.84 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM28117v1 |
| GenBank Assembly Accession | GCA_000281175.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000281175.1 [NCBI] |
| BioSample | SAMD00061033 [NCBI] |
| BioProject | PRJDB47 [NCBI] |
| Submitter | National Institute of Technology and Evaluation |
| Submission Date | 2016-09-28T01:01:54.070 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 926550 |
| Isolation Source | |
| Geo Location | |
