Taxon Table | Genome Table
Genome Meta Information:
Actinomyces
naeslundii
Howell 279 (GCA_000285995.1)
| HOMD Genome-ID |
GCA_000285995.1
|
| HOMD Taxon-ID |
HMT-0176
|
| Species Name (in use by HOMD) |
Actinomyces naeslundii
|
| Organism Name (as deposited) |
HMT-176 Actinomyces naeslundii Howell 279
|
| Strain or Isolate |
Howell 279
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;
s__Actinomyces naeslundii |
| Sequencing Technology |
Illumina
|
| Genome Coverage |
11
|
| Contigs |
Number of Contigs: 243
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
3,114,341 (bp) |
| GC Percentage |
67.85
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/995/GCA_000285995.1_AneasH279v1.0
|
| CDS |
2727
|
| Genes |
2801
|
| mRNA |
2801
|
| misc RNA |
16
|
| rRNA |
8
|
| tRNA |
49
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
99.97 %
|
| CheckM Completeness |
93.83 %
|
| CheckM Contamination |
1.24 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
Ambiguous
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
AneasH279v1.0
|
| GenBank Assembly Accession |
GCA_000285995.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_000285995.1
[NCBI]
|
| BioSample |
SAMN00828754
[NCBI]
|
| BioProject |
PRJNA78549
[NCBI]
|
| Submitter |
J. Craig Venter Institute
|
| Submission Date |
2012-03-15T11:25:03.140
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
ALJK01
|
| NCBI TaxID |
1115803
|
| Isolation Source |
|
| Geo Location |
not determined
|
